Table 1.
Gene Ontology terms significantly overrepresented among the differentially expressed genes comparing tissue 1 with tissue 2 (Fisher's exact test, p ≤ 0.05)
| Comparison | Gene Ontology | |||
|---|---|---|---|---|
| Tissue 1 | Tissue 2 | Biological Process | Cellular Component | Molecular Function |
| zygotic embryo (ID 1.3) |
somatic embryo (ID 2.1.14) |
Chloroplast | ||
| embryogenic callus (ID 2.1.1) |
non-embryogenic callus (ID 2.3.1) |
response to stress, response to biotic stimulus | extracellular region | |
| embryogenic tissue, 4 h after induction (ID 2.1.11) |
embryogenic tissue, 3 d after induction (ID 2.1.12) |
cell wall | catalytic activity | |
| embryogenic tissue, 3 d after induction (no torpedo-shaped embryos generated) (ID 2.1.9) |
embryogenic tissue, 3 d after induction (torpedo-shaped embryos generated) (ID 2.1.12) |
response to abiotic stimulus | cell wall, cytosol | |
| embryogenic tissue, 3 d after induction (ID 2.1.12) |
Torpedo-shaped somatic embryos, 3 weeks after induction (ID 2.1.14) |
response to abiotic stimulus | ||