Table.
Isolate category | Isolate subcategory |
Isolation period | Simpson’s Index of Diversity * | No. isolates tested † | PFGE pattern numbers | No. isolates with PFGE pattern (%) | ||
---|---|---|---|---|---|---|---|---|
Region | Host | Attributes | ||||||
Recent isolates | Northeast | Cattle | Clinical | 2007–2009 | 0.26 (0.12 – 0.40)‡ | 64 | CU-213 | 55 (86%) |
CU-843 | 1 (2%) | |||||||
CU-846 | 1 (2%) | |||||||
CU-848 | 3 (5%) | |||||||
CU-849 | 1 (2%) | |||||||
CU-973 | 3 (5%) | |||||||
Northeast | Cattle | Non-clinical | 2007–2009 | 0.06 (0.00 – 0.18) ‡ | 32 | CU-213 | 31 (97%) | |
CU-843 | 1 (3%) | |||||||
Northeast | Farm environment | 2007–2009 | 0.25 (0.08 – 0.42) ‡ | 45 | CU-213 | 39 (87%) | ||
CU-839 | 1 (2%) | |||||||
CU-840 | 2 (4%) | |||||||
CU-843 | 2 (4%) | |||||||
CU-874 | 1 (2%) | |||||||
Human isolates | Northeast | Human | Clinical | 2007–2009 | n/a | 3 | CU-213 | 3 (100%) |
Comparison Isolates | Northwest | Animals | Clinical & Non-clinical | 1986–2007 | 0.43 (0.30 – 0.55) ‡ | 93 | CU-213 | 70 (75%) |
CU-967 | 5 (5%) | |||||||
CU-968 | 6 (6%) | |||||||
CU-969 | 8 (9%) | |||||||
CU-970 | 1 (1%) | |||||||
CU-971 | 1 (1%) | |||||||
CU-972 | 1 (1%) | |||||||
CU-975 | 1 (1%) |
Simpson’s Index of Diversity value for all recent isolates combined: 0.21 (0.12 – 0.31);
none of the isolates was resistant to any of the antimicrobial drugs tested, and none of the tested isolates was positive for spvA;
95% Confidence Interval;