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. Author manuscript; available in PMC: 2012 Jun 2.
Published in final edited form as: Vet Microbiol. 2011 Feb 1;150(3-4):389–393. doi: 10.1016/j.vetmic.2011.01.026

Table.

Overview of study isolates

Isolate category Isolate subcategory
Isolation period Simpson’s Index of Diversity * No. isolates tested PFGE pattern numbers No. isolates with PFGE pattern (%)
Region Host Attributes
Recent isolates Northeast Cattle Clinical 2007–2009 0.26 (0.12 – 0.40) 64 CU-213 55 (86%)
CU-843 1 (2%)
CU-846 1 (2%)
CU-848 3 (5%)
CU-849 1 (2%)
CU-973 3 (5%)

Northeast Cattle Non-clinical 2007–2009 0.06 (0.00 – 0.18) 32 CU-213 31 (97%)
CU-843 1 (3%)

Northeast Farm environment 2007–2009 0.25 (0.08 – 0.42) 45 CU-213 39 (87%)
CU-839 1 (2%)
CU-840 2 (4%)
CU-843 2 (4%)
CU-874 1 (2%)

Human isolates Northeast Human Clinical 2007–2009 n/a 3 CU-213 3 (100%)

Comparison Isolates Northwest Animals Clinical & Non-clinical 1986–2007 0.43 (0.30 – 0.55) 93 CU-213 70 (75%)
CU-967 5 (5%)
CU-968 6 (6%)
CU-969 8 (9%)
CU-970 1 (1%)
CU-971 1 (1%)
CU-972 1 (1%)
CU-975 1 (1%)
*

Simpson’s Index of Diversity value for all recent isolates combined: 0.21 (0.12 – 0.31);

none of the isolates was resistant to any of the antimicrobial drugs tested, and none of the tested isolates was positive for spvA;

95% Confidence Interval;