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. 2010 May 27;44(4):439–447. doi: 10.1165/rcmb.2009-0307OC

TABLE 1.

OLIGONUCLEOTIDE PRIMERS USED FOR PCR IN THESE STUDIES

Primer Pair Oligonucleotide Sequence GenBank Identification
HBA F: 5′-ATGTTTGCTAGCTTCCCCACCACCAAG-3′ BC043020
R: 5′-GCTTAACGGTATTTGGAGGTCAGCACG-3′
HBB F: 5′-TGATGCTGAGAAGGCTGCTGTCTCTG-3′ NM_008220
R: 5′-GTGCCCTTGAGGCTGTCCAAGTGA-3′
SP-B F: 5′-TGCCAAGAGTGTGAGGATATTGTCCAC-3′ NM_147779
R: 5′-CCAGCTTGTCCAGCAGAGGGTTTG-3′
SP-C F: 5′-CCGGATTACTCGGCAGGTCCCAG-3′ NM_011359
R: 5′-ATGCCAGTGGAGCCGATGGAAAAGG-3′
HIF1α F: 5′-CTTCTGGATGCCGGTGGTCTAGAC-3′ NM_010431
R: 5′-CTCACTGGGCCATTTCTGTGTGTAAG-3′
HIF2α F: 5′-AGCTCCTGTCCTCAGTCTGCTCTG-3′ NM_010137
R: 5′-CCTGTTAGTTCTACCTGAGTAAGTCCC-3′
ACT F: 5′-TCCTTCTTGGGTATGGAATCCTGTGG-3′ NM_007393
R: 5′-CGCTCAGGAGGAGCAATGATCTTG-3′
GATA1 F: 5′-GTCCTCACCATCAGATTCCACAGG-3′ NM_008089
R: 5′-ATTCCCTCCATACTGTTGAGCAGTGG-3′
GATA2 F: 5′-GTTCCCAAGACACAGTAGTGGACC-3′ NM_008090
R: 5′-CTGCGAGTCGAGATGGTTGAAGAAG-3′
NFE2 F: 5′-GCAGGAATCCTTTGTGCTTGTGGAG-3′ NM_008685
R: 5′-TAGACCCTGCAGCTCAGTAATGGAC-3′
KLF F: 5′-TCTTGAATTGTCTGGGACCTGGGAC-3′ NM_010635
R: 5′-AGGTGCGAGCTCTTGGAGTAGCTC-3′
CP2 F: 5′-GGAACCTGGCACATCTGAATGTTGG-3′ NM_033476
R: 5′-CATTACCACTCTGCCCTCTACAAACC-3′
ALAS2 F: 5′-ACTCACCGTCTTTGGTTCGTCCTC-3′ NM_009653
R: 5′-TGAGAACAGGTTGGTCCTTGAGTGG-3′
TTF-1/Nkx2-1 F: 5′-GCGCCATGTCTTGTTCTACCTTGC-3′ NM_009385
R: 5′-GTCGTCCAGCAGTTTGGTCTTTGTG-3′
SLC4A1/band3 F: 5′-TGGCTGCTGTCATCTTCATCTAC-3′ NM_011403
R: 5′-TTTGGGCTTCATCACAACAGG-3′

Definition of abbreviations: F, forward (sense); R, reverse (antisense); HBA, hemoglobin α; HBB, hemoglobin β major; SP-B, surfactant protein B; SP-C, surfactant protein C; HIF, hypoxia-inducible factor; ACT, β-actin; NFE2, nuclear factor (erythroid-derived 2, p45); KLF, Kruppel-like factor 1 (erythroid); CP2, alpha-globin transcription factor CP2; ALAS2, δ-aminolevulinate synthase 2; TTF-1, thyroid transcription factor (also known as Nkx2-1); SLC4A1, solute carrier family 4 (anion exchanger), member 1 (also known as band 3). Oligonucleotides were designed according to murine sequences found at the GenBank accession numbers listed in the right column.