Table 2.

Differentially Expressed Glycoproteins Identified in Subjects with Bladder Cancer and Non-cancer^a

			unique peptide No.		expression in cancer cases	frequency*
protein ID	protein name	p-value (FDR)	non-cancer	cancer		non-cancer	cancer
P01009	Alpha-1-antitrypsin	< 0.01	20	20	up	0.87	0.98
P02787	Serotransferrin	0.04	20	25	up	0.62	0.91
P02790	Hemopexin	0.02	14	20	up	0.81	0.96
P07602	Proactivator polypeptide	< 0.01	7	6	down	0.6	0.34
P07911	Uromodulin	0.08	19	16	down	0.91	0.7
P10451	Osteopontin	0.06	4	4	down	0.53	0.29
P16070	CD44 antigen	0.06	4	3	down	0.96	0.91
Q16769	Glutaminyl-peptide cyclotransferase	< 0.01	6	3	down	0.51	0.2
Q9BY67	Cell adhesion molecule 1	< 0.01	5	4	down	0.51	0.2

^aSpectral counts of urinary glycoproteins with significantly differential abundance (FDR-value < 0.1).

^*The candidate must exist in more than half of the non-cancer or cancer samples to qualify as a potential marker.