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. 2003 Dec;23(24):9189–9207. doi: 10.1128/MCB.23.24.9189-9207.2003

TABLE 3.

Homology search of trapped sequencesa

Mouse ID Founder Ensembl ID Celera ID Gene product name Location of trapped sequences Orientation of trapped sequence relative to trapped gene Chromosome
TM1 T1 ENSMUSG00000027568 mCG6723 Neurotensin receptor Downstream Reverse 2
TM3 T1 None mCG21578 PD Intron Reverse 3
TM4 T2 ENSMUSG00000027835 mCG113365 Programmed cell death 10 Intron Reverse 3
TM6 T2 ENSMUSG00000031632 mCG1048909 Testican3 Intron Reverse 8
TM11 T1 None mCG1048007 PD Downstream Reverse 12
TM12 T1 None mCG1042538 PD Upstream Forward 14
TM17 T1 None mCG1042476 PD Intron Reverse 14
TM18 T1 ENSMUSG00000028247 mCG2931 Hexaprenyldihydroxybenzoate methyltransferase Exon Forward 4
TM21 T3 None mCG133512 Integrin alpha D Exon Forward 7
TM22 T2 None mCG5630 Acetylglucosaminyltransferase like Exon Forward 8
TM29 T2 ENSMUSG00000031620 mCG13289 RIKEN cDNA 1700007B14 Exon Forward 8
TM31 T1 None mCG66781 PD Intron Forward 15
TM36 T2 ENSMUSESTG00000023444 None RIKEN cDNA A730054M09 Intron Reverse 7
None mCG1028243 PD Intron Forward 7
TM42 T3 None mCG67582 PD Downstream Forward 9
TM44 T2 None mCG1048972 PD Intron Reverse 8
TM48 T2 ENSMUSESTG00000028919 mCG11950 Aldosterone receptor Exon Forward 8
TM54 T2 ENSMUSESTG00000025653 None RIKEN cDNA C730040P17 Intron Reverse 16
TM67 T1 ENSMUSESTG00000001992 mCG56153 Teashirt2 Exon Forward 2
TM73 T2 ENSMUSG00000006273 mCG16916 Vascuolar ATP synthase subunit B, brain isoform Exon Forward 8
TM75 T3 ENSMUSG00000028617 mCG16086 RIKEN cDNA A930011F22 Exon Forward 4
TM83 T1 None mCG58496 PD Intron Reverse 12
TM88 T1 ENSMUSG00000033865 mCG122280 T-cell death-associated gene 8 Exon Forward 12
TM90 T2 ENSMUSG00000031620 mCG13292 RIKEN cDNA 1700007B14 Exon Forward 8
TM111 T4 None mCG8477 Neurexin 3 Intron Reverse 12
TM115 T4 ENSMUSG00000033935 mCG6347 Neurexin 3 Exon Forward 12
TM117 T5 ENSMUSG00000029465 mCG12172 Actin-related protein 2/3 complex subunit3 Exon Forward 5
TM129 T4 ENSMUSG00000044326 mCG128599 Vomeronasal 1 receptor A1 Downstream Reverse 6
TM145 T4 None mCG8482 Glyceraldehyde 3-phosphate dedydrogenase Downstream Forward 12
TM180 T4 ENSMUSG00000051350 mCG50210 60S ribosomal protein L31 Downstream Reverse 12
TM189 T4 ENSMUSESTG00000010144 mCG8477 Neurexin 3 Exon Forward 12
TM195 T4 ENSMUSG00000024109 mCG15583 Neurexin 1 Exon Forward 12
TM199 T4 None mCG124030 Seven transmembrane helix receptor Intron Reverse 15
TM205 T4 None mCG1047979 40S ribosomal protein S6 Exon Forward 12
TM206 T4 None mCG6347 Neurexin 3 Intron Reverse 12
a

From the database analysis of 81 sequences trapped by the poly(A) trap scheme shown in Fig. 5B, the results for 34 mice with sequences mapped near or within genes are presented. Five different founder mice (T1 to T5) bearing the trap vector were used. The effect of the DST on phenotypes was tested in lines T1 and T4. Mice bearing the DST were identified by FISH analysis, and no overt phenotypes were observed, indicating that these lines are suitable for phenotypic analysis of mutations subsequently introduced by transposition. Definitions can be found in the footnotes to Table 2.