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. 2011 May 20;6(5):e20332. doi: 10.1371/journal.pone.0020332

Table 1. DNA sequence identities (%) of sdr genes between S. aureus isolates in Canada and sequenced S. aureus strains.

Strain Ontario & Western Canada Isolates Quebec & Eastern Canada Isolates
sdrC(2001)* sdrD(3209) sdrE(2649) sdrH(1233) sdrC(1969) sdrD(3209) sdrE(2649) sdrH(1299)
RF122 90.91 - 87.79 89.17 100.00 - 99.96 100.00
MRSA252 90.10 - 87.13 93.66 95.42 - 95.16 87.55
ST398 90.81 89.70 - 91.20 95.92 89.70 - 91.91
ED133 90.61 89.95 96.43 92.70 95.52 89.95 89.09 93.10
JKD6159 88.58 89.31 98.83 90.63 91.08 89.31 87.56 90.35
TCH130 99.15 99.84 96.70 99.36 90.81 99.84 86.72 89.32
MSSA476 94.99 93.68 96.32 89.84 91.12 93.68 88.56 86.05
MW2 94.94 93.62 96.32 96.80 91.07 93.62 88.56 91.18
ED98 95.53 99.60 97.63 97.71 88.94 99.60 88.19 90.80
N315, JH1, JH9, 04-02981 95.48 99.63 97.60 97.71 88.94 99.63 88.12 90.80
Mu50, Mu3 95.53 99.63 97.56 98.65 88.94 99.63 88.08 89.99
TW20 94.39 94.44 96.17 96.80 89.60 94.44 88.53 91.18
NCTC8325 94.39 94.32 - 96.72 89.60 94.32 - 91.10
COL 94.44 94.48 95.56 97.71 89.55 94.48 87.97 90.88
Newman 94.44 94.51 95.56 96.80 89.55 94.51 87.97 91.18
USA300_FRP3757USA300_TCH1516 94.39 94.44 95.63 97.16 89.50 94.44 88.04 90.36

*Nucleotide numbers of the A region and B repeats of sdrC, sdrD and sdrE and the full sequence of sdrH in bovine mastitis isolates.