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. Author manuscript; available in PMC: 2012 Jun 1.
Published in final edited form as: J Immunol. 2011 Apr 27;186(11):6357–6367. doi: 10.4049/jimmunol.1100116

Table 4.

Key residues for CDR detection. Underlined residues denote additional residues that must be incorporated into the classical antibody CDR identification rules (32) in order to detect cAb CDRs. Brackets enclose multiple residues codes that appear at each sequence position. X indicates any of the 20 amino acids.

CDR Loop Chothia Definition(32) Starting Position Preceded By Length(Residues) Followed By

Classical Camelids
H1 H26-H35 After first Cys CXXX 10-12 7-13 W[IVFYAMLND][RKQVNC][QKHELR]
H2 H50-H56 Always 15 residues after H1 end [WYLAFGS][ILVM][GASV] 7,8,10 6-13 XX[YFLS]XXXX[QKRES]
H3 H95-102 Always 33 residues after H2 end CXX 3-22 8-24 [WR]GX[GRDS]