Figure 6.11.4.

(A) Transcript table in the gene tab for the human HFE gene. Fourteen transcripts are shown. The twelve protein-coding transcripts are listed first. Seven transcripts are found in the CCDS set, and all transcripts have been identified by manual annotation (the HAVANA project), as indicated by transcript numbers beginning with “0.” (B) Transcript diagrams in the gene summary view in the gene tab. Gold transcripts are agreed upon by HAVANA and Ensembl automatic annotation. Boxes are exons, and connecting lines are introns. Filled boxes show coding sequence, while unfilled boxes indicate untranslated sequence (UTR). Transcripts are on the forward strand of the chromosome, as they are drawn above the blue line corresponding to the assembly. A greater than or less than sign after the transcript identifier indicates the strand by showing direction of translation. For color version of this figure go to http://www.currentprotocols.com/protocol/hg0611.