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. 2011 Apr 13;11:96. doi: 10.1186/1471-2148-11-96

Table 2.

Indices of genic diversity in Riftia pachyptila samples.

Locality
Locus N27 N21 N9 GAR S7 S11 S17 S32

Cytb n1 33 44 19 17 17 18 14 9
 No. alleles (a) 1 4 2 2 2 2 1 1
 Gene diversity (HS) 0.211 0.189 0.337 0.214 0.108 0 0
Rpt 46.1 n 56 98 38 36 36 38 34 16
 No. alleles (a) 4 4 3 3 2 3 2 3
 Gene diversity (H) 0.674 0.660 0.647 0.446 0.157 0.198 0.258 0.242
 Fixation index (FIS) 0.155 0.073 0.108 0.200 -0.063 -0.067 0.324 -0.037
Rpt 84.1 n 62 104 38 40 36 42 40 18
 No. alleles (a) 4 6 4 4 3 2 2 2
 Gene diversity (H) 0.632 0.650 0.494 0.272 0.475 0.136 0.224 0.111
 Fixation index (FIS) -0.124 -0.067 -0.068 -0.095 0.304 -0.053 -0.118 0.000
ATPSα n 54 106 38 40 38 21 38 18
 No. alleles (a) 2 2 2 2 1 1 1 1
 Gene diversity (H) 0.492 0.374 0.149 0.445 0 0 0 0
 Fixation index (FIS) 0.098 0.092 -0.059 0.309
Pr(total FIS = 0) 0.404 0.600 0.383 0.255 0.176 0.230 0.461 1.000
Mean of HS 0.450 0.474 0.370 0.375 0.211 0.110 0.121 0.082
 s.d. of HS 0.310 0.219 0.240 0.086 0.197 0.083 0.140 0.081
Total alleles (A) 11 16 11 11 8 8 6 7
Allelic richness (a') 4 2.37 2.89 2.50 2.57 1.90 1.68 1.48 1.72
Private alleles 4 0.14 0.65 0.08 0.40 0.23 0.11 0.00 0.25

1 Number of gene sequences.

4 Rarefaction estimates of mean allelic richness and mean number of private alleles per locus.