Table 2.
Parameter | Value |
---|---|
No. of NOE restraints | 179 |
No. of intraresidue restraints | 90 |
No. of interresidue restraints | 89 |
Total no. of NOE restraints violateda | 52 |
Total % NOE violations | 29.1 |
Total no. of intraresidue restraints violated | 10 |
Total no. of interresidue restraints violated | 42 |
Avg RMSDb (Cα − residuesc) | 1.0 ± 0.5 Å |
Avg no. of relative NOE violations | 0.081 |
A restraint is considered to be violated if the relative average violation is larger than 0.1. The average is over the 26 ns of simulation trajectory (the first 5 ns of equilibration were not used for the analysis).
RMSD, root mean square deviation, calculated by comparing the RMSD values between the representative structures shown in Fig. 10.
Cα − residues are the alpha carbon residues.