Table 2.
Activity of PSI-352666 against genotype 1b, 2a, 3a, and 4a recombinant NS5BΔ21 polymerases and human RNA polymerase II and DNA polymerases α, β, and γ
| Enzyme-based assay and genotype or enzyme | IC50 (μM) |
|
|---|---|---|
| PSI-352666a | Positive controlb | |
| HCV NS5B | ||
| 1b | 1.0 ± 0.2 | 0.1 ± 0.04 |
| 2a | 4.7 ± 0.6 | 0.1 ± 0.02 |
| 3a | 1.3 ± 0.5 | 0.03 ± 0.004 |
| 4a | 4.2 ± 0.8 | 2.9 ± 0.6 |
| Human polymerase | ||
| DNA Pol α | 900 ± 140 | 16 ± 2 |
| DNA Pol β | >1,000 | 9.0 ± 0.4 |
| DNA Pol γ | >1,000 | 79 ± 4 |
| RNA Pol II | >500 | <1 |
HCV NS5B polymerase activity in the presence of PSI-352666 was determined by measuring the incorporation of [α-32P]UTP into the RNA product using an HCV IRES template. The amount of product was quantified by phosphorimaging. Human DNA polymerase α, β, and γ activities were quantified by measuring the synthesized radiolabeled products with a filter binding assay. Human RNA polymerase II synthesized RNA products from in vitro transcription using HeLa nuclear extract were analyzed using a 6% polyacrylamide sequencing gel and phosphorimaging. Results were obtained from at least two independent experiments in duplicate and are reported as means ± standard deviations.
The positive control for HCV NS5B was 3′-dCTP, that for DNA Pol α was aphidicolin, that for DNA Pols β and γ was d-ddFCTP, and that for RNA Pol II was α-amanitin.