Table 3.

Genome Zipper Statistics: Genes, ESTs, and 454 Reads Associated with the Genome Zipper

Data Sets	1H MoBe	1H Morex	1H Betzes	2H	3H	4H	5H	6H	7H	All
Number of markers	332	332	332	468	445	314	492	337	397	2,785
Number of markers with associated gene from reference genome(s)	210	196	191	286	295	217	299	198	214	1,719
Number of matched array hybridization probes	732	n.d.	n.d.	2,044	1,502	1,242	1,935	1,407	2,003	10,865
Number of matched fl-cDNAs	1,676	1,287	1,247	1,619	1,628	1,255	1,474	1,058	1,395	10,105
Number of nonredundant sequence reads	51,972	28,485	17,716	29,250	30,576	21,402	25,262	19,536	22,420	200,418
Number of nonredundant ESTs	3,543	2,631	2,354	3,678	3,392	2,605	3,354	2,387	3,120	22,079
Number of Brachypodium genes	2,141	1,888	1,875	2,379	2,363	1,876	2,159	1,588	1,915	14,421
Number of rice genes	1,845	1,541	1,321	2,073	2,016	1,614	1,576	1,348	1,621	12,093
Number of sorghum genes	1,833	1,669	1,432	1,946	2,039	1,284	1,695	1,369	1,721	11,887
Number of nonredundant anchored gene loci in Genome Zipper	3,331	2,456	2,261	3,616	3,394	2,709	3,208	2,304	3,204	21,766

The table gives an overview of the data associated with and anchored along the chromosomal zippers. The number of markers is allocated to individual chromosomes. Data for the sequence collections of the individual cultivars used for 1H (Betzes and Morex) are listed separately as well as a combined data set (MoBe). n.d., not determined.