. 2011 Apr 22;23(4):1293–1306. doi: 10.1105/tpc.111.083329

Table 1.

Examples of Genes Bound by LFY

Gene	Primary Gene Symbol	Rank	POcc	Best Site
Flowering
At5G03840	underline>TFL1/underline>	1	0.01803	−13.60
At2G45660	underline>SOC1/underline>	770	0.0098	−12.49
At2G39250	SCHNARCHZAPFEN	1029	0.0070	−13.95
At3G58070	GLABROUS INFLORESCENCE STEMS	259	0.0034	−19.26
At3G58070	GLABROUS INFLORESCENCE STEMS	288	0.0225	−10.25
1482	0.0024	−19.25
At1G01183	miR156	8	0.0085	−13.61
At4G35900	FD	796	0.0037	−15.69
At4G01500	NGATHA4	725	0.0081	−13.49
At1G25560	TEM1	6	0.0048	−17.12
		498	0.0026	−19.40
At4G25520	SLK1	68	0.0042	−16.63
At2G45190	FILAMENTOUS FLOWER	503	0.0030	−16.45
Floral meristem specification
At5G61850	LFY	1269	0.0156	−10.82
At3G57130	BOP1	165	0.0476	−7.82
		1400	0.0026	−18.83
At2G41370	BOP2	166	0.0051	−16.05
At2G41370	BOP2	556	0.0034	−20.12
671	0.0112	−11.83
At5G18560	PUCHI	574	0.0046	−18.27
Floral organ specification and development
At1G69120	APETALA1	19	0.0609	−7.33
		1216	0.055	−14.22
At4G18960	AG	888	0.0104	−14.28
At3G54320	WRINKLED1	815	0.0041	−14.95
At1G24260	SEPALLATA3	25	0.0096	−16.15
		829	0.0023	−20.59
At2G03710	SEPALLATA4	983	0.0049	−14.70
At1G31140	GORDITA	1421	0.0403	−8.20
At5G02030	PENNYWISE	1221	0.0043	−14.77
At3G63530	BIG BROTHER	940	0.0110	−12.23
		989	0.0016	−19.54
At5G67060	HECATE1	527	0.0068	−13.97
At4G36260	STYLISH 2	520	0.0071	−13.81
At5G07280	EMS1	772	0.0044	−14.70
At3G02000	ROXY1	367	0.0084	−14.60
At2G28056	miR172	1213	0.0054	−16.79
At2G28610	PRESSED FLOWER	424	0.0166	−12.23
At4G37750	AINTEGUMENTA	462	0.0024	−20.34
		1460	0.0034	−18.39
At5G10510	AINTEGUMENTA-like 6	1653	0.0056	−14.89
At1G01510	ANGUSTIFOLIA 3	723	0.0019	−21.45
Gibberellins
At5G15230	GASA4	231	0.0095	−12.69
		431	0.0062	−13.83
At4G25420	GA2OX1	1427	0.0086	−13.52
At1G30040	GA2OX2	1045	0.0074	−13.94
At3G63010	GID1B	350	0.0068	−14.69
At3G63010	GID1B	425	0.0052	−14.82
1536	0.0025	−17.42
At1G15550	GA3OX1 (GA4)	1573	0.0056	−17.72
At1G80340	GA3OX2	879	0.0052	−15.90
Auxin
At1G19840	SAUR-like	263	0.0416	−8.21
At1G19850	MONOPTEROS	289	0.0217	−10.15
At2G01420	PIN4	235	0.0029	−17.34
		999	0.0053	−15.03
At3G62980	TIR1	100	0.0107	−12.78
		110	0.0033	−17.03
At5G11320	YUCCA4	510	0.0061	−15.82
		1261	0.0055	−14.73
At1G04240	SHY2	1350	0.0043	−15.32
At2G34650	PINOID	225	0.0040	−15.83
At1G29430	Auxin-responsive (SAUR-like)	212	0.0228	−9.85
		438	0.0151	−11.53
Cytokinins
AT1G59940	ARR3	1088	0.0204	−10.13

For a selection of genes expressed in floral tissues or dependent on LFY, the table indicates the rank from the ChIP-seq experiments (Rank), the POcc value, and the score of the best LFY binding site. Binding profiles are shown in Figure 4 or Supplemental Figure 1 online for the genes with underlined names.