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Scaffold density vs. QMC-based and MRP FN rate. False Negative (FN) error rates and error bars of QMC variants and gMRP on mixed source tree datasets with 100, 500, and 1000 taxa, as a function of the scaffold density. Points are graphed for a method if it had at least ten datasets (or four datasets, for the 1000-taxon model conditions) that completed in common with all other methods.
