Table 1. Details of PCRs performed.
PCR | Primers and probes | Reagents | Conditions |
gag R1gag R2 | 419F 1154R [3]gagIF gagIR [1] | Invitrogen Platinum Taq | 4 min at 94°C(1 min 94°C, 1 min 57°C, 1 min 72°C)×45 cycles and 10 min 72°C. |
gag R1gag R2 | 419F 1154R [3]gagIF gagIR [1] | Applied Biosystems Taq Gold LD | 10 min at 95°C(1 min 95°C, 1 min 57°C, 1 min 72°C)×45 cycles and 10 min 72°C. |
XMRV Taq Man | XMRV Probe, F, R [17] | Qiagen Quanti Tect Probe kit | 15 min at 95°C(15 secs 95°C, 1 min 60°C)×60 cycles. |
XMRV/pMLV Taq Man | P2, F3, R4 | Qiagen Quanti Tect Probe kit | 15 min at 95°C(15 secs 95°C, 1 min 60°C)×60 cycles. |
XMRV/pMLV with IAPE Taq Man | P2, F3, R4IAPE D1Probe, D1F, D1R | Invitrogen Platinum Taq | 4 min at 95°C(15 secs 95°C, 1 min 72°C)×60 cycles. |
CDC pol | XPOLOF XPOLOR [20] XPOLIF XPOLIR [20] | Invitrogen Platinum Taq | 4 min at 94°C(30 secs 94°C, 30 secs 57°C, 1 min 72°C)×45 cycles and 10 min 72°C. |
400 nM concentrations of primers and 200 nM probes were used in all the TaqMan assays.