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. 2000 Apr 3;19(7):1505–1515. doi: 10.1093/emboj/19.7.1505

Table I. Relative affinitiesa of Nak peptides for the dNumb PTB domain.

Peptide Sequence Rel. affinity (%)
  –6–4–20+2+4  
Nak–c G-F-S-N-M-S-F-E-D-F-P 100
G-6A A-F-S-N-M-S-F-E-D-F-P 135
F-5A G-A-S-N-M-S-F-E-D-F-P 66
S-4A G-F-A-N-M-S-F-E-D-F-P 250
N–3A G-F-S-A-M-S-F-E-D-F-P N/D
M-2A G-F-S-N-A-S-F-E-D-F-P 400
S-1A G-F-S-N-M-A-F-E-D-F-P 851
F0A G-F-S-N-M-S-A-E-D-F-P 3.5
E+1A G-F-S-N-M-S-F-A-D-F-P 82
D+2A G-F-S-N-M-S-F-E-A-F-P 27
F+3A G-F-S-N-M-S-F-E-D-A-P 92
Nak-AA G-F-S-N-A-A-F-E-D-F-P 1500
NakΔC G-F-S-N-M-S-F-E <1
Nak▿N S-A-K-T-G-F-S-N-M-S-F-E-D-F-P 95
N–TrkA/ H-I-I-E-N-M-S-F-E-D-F-P <1
C–Nak    

aRelative affinities were calculated according to the IC50 (concentration for 50% inhibition of binding) value of an individual peptide when competing against fluorescein-labeled peptide Nak–c for binding to the dNumb PTB domain. Relative affinities were normalized to that of the unlabeled Nak–c peptide, set to 100%. Repetition of the measurements produced values with <5% deviation from those reported.