Table 2. Allele frequencies and in vitro effects of UGT1A variants examined in pharmacogenetic studies of anticancer drugs.
UGT | Expression | UGT alleles | Nucleotide change (amino acid change) |
In vitro effect | Frequency |
---|---|---|---|---|---|
UGT1A1 | Hepatic | UGT1A1*1 | Normal activity | 61–72% in Caucasians, 45–52% in black populations, 90–98% in Japanese populations, 87–93% in Koreans and 84% in Chinese populations [9,56] |
|
UGT1A1*6 | 211G>A(G71R) [223; | Reduced activity [18,57] | 0–1% in Caucasians, 0% in black populations, 13–18% in Japanese populations, 21–24% in Koreans and 23% in Chinese populations [9,56,67] |
||
UGT1A1*27 | 686C>A (P229Q) [223 | Reduced activity [18] | 0% in Caucasians and black populations and 1–4% in Asians [23,71] |
||
UGT1A1*28 | A(TA)6TAA>A(TA)7TAA [28] | Reduced activity [16,28,224] | 29–39% in Caucasians, 35–45% in black populations, 9–13% in Japanese populations, 7–13% in Koreans and 16% in Chinese populations [9,56] |
||
UGT1A1*60 | −3279T>G [225] | Reduced activity [30,71] | 44–55% in Caucasians, 85% in African–Americans, 17–26% in Japanese populations, 24–33% in Koreans and 30% in Chinese populations [30,56] |
||
UGT1A1*93 | −3156G>A [225] | Reduced activity [30] | 30–31% in Caucasians, 29% in African–Americans and 10% in Asians [30,68] |
||
| |||||
UGT1A4 | Hepatic | UGT1A4*1a | Normal activity | ||
UGT1A4*2 | 70C>A (P24T) [186] | Substrate-dependent effect [186,226] | 8% in Caucasians [186] | ||
UGT1A4*3b | 142T>G (L48V) [186] | Decreased or no activity [186] | 9% in Caucasians and 13% in Japanese populations [186,227] |
||
| |||||
UGT1A7 | Extrahepatic | UGT1A7*1a | High activity | 34–42% in Caucasians, 38% in African–Americans and 59% in Japanese populations [9] |
|
UGT1A7*2 | 387T>G/391C>A/392G>A (N129K/R131K) [23] |
High activity [18,23] | 24–34% in Caucasians, 39% in African–Americans, 15% in Japanese populations and 27% in Taiwanese Chinese populations [9,77] |
||
UGT1A7*3 | 387T>G/391C>A/392G>A/622T>C (N129K/R131K/W208R) [23] |
Low activity [18,23] | 23–36% in Caucasians, 23% in African–Americans, 26% in Japanese populations and 15% in Taiwanese Chinese populations [9,77] |
||
UGT1A7*4 | 622T>C (W208R) [23] | Low activity [18,23] | 1–2% in Caucasians, 1% in black populations, 0% in Japanese populations and 0% in Taiwanese Chinese populations [9,77] |
||
| |||||
UGT1A8 | Extrahepatic | UGT1A8*1a | Normal activity | 55% in unknown population [228] | |
UGT1A8*2 | UGT1A8*2 (518G>C, A173G) [228] | Similar activity to UGT1A8*1a [228] | 15% in unknown population [228] | ||
UGT1A8*3 | UGT1A8*3 (830G>A, C277Y) [228,229] |
Severely reduced activity [228,229] | 2% in unknown population [228] | ||
| |||||
UGT1A9 | Hepatic | UGT1A9*1a | |||
UGT1A9*1b | −118(dT)9>10 [72] | Luciferase activity increased in one study [72], but another study [74] did not find a significant change in luciferase activity or an association with hepatic UGT1A9 protein content |
36–41% in Caucasians, 44% in black populations and 51–60% in Asians [68,72,75,230] |
||
I399C>T | I399C>T [73] | Increased protein expression and activity in one study [73]. No association with gene expression and activity in another study [75] |
38–49% in Caucasians, 42% in Africans and 64% in Japanese populations [73,75,83] |
||
| |||||
UGT1A10 | Extrahepatic | UGT1A10*1a | Normal activity | ||
UGT1A10*2a | 415G>A (E139K) [231] | 0% in Caucasians, 3–5% in black populations and 0% in Asians [231] |
|||
| |||||
UGT2B7 | Hepatic | UGT2B7*1a | 46–51% in Caucasians and 73% in Asian–Americans and Japanese populations [9] |
||
UGT2B7*2a | 802C>T (H268Y) [232] | No change in substrate activity for most substrates [148,232-234], increased activity for very few substrates [233] |
49–54% in Caucasians and 27% in Asian–Americans and Japanese populations [9] |
||
−161T>C | −161T>C (relative to the ATG) [151] | Decreased activity [151] | 49% in Caucasians and 69% in African–Americans [151] | ||
| |||||
UGT2B17 | Hepatic | UGT2B17*1 | 68–69% in Caucasians and 79% in African–Americans [235,240] |
||
UGT2B17*2 | Deletion of a 150-kbp region spanning the UGT2B17 gene [235,236] |
Reduced activity in the homozygous state [237-241] |
19–33% in Caucasians, 21% in African–Americans, 22% in Yorubans and 84% in Japanese populations and Chinese populations [235,239,240,242,243] |
UGT: Uridine 5′-diphosphoglucuronosyltransferase.