Table 1. Oligonucleotide sequences used in this study.
Primer | Sequences(5′-3′) | Restrictive sites |
Mutant construction | ||
spkC(slr0599) | ||
Upstream | TTGAATTCGTTACCCCACTCAAAC | EcoRI |
ATGGATCCCTTGGTCTATGACCTT | BamHI | |
Downstream | ATGTCGACTTGCTAATGGCAAGAC | SalI |
AATAAGCTTCCCTAATTTTGCTCGG | HindIII | |
spkG(slr0152) | ||
Upstream | CAGAATTCATGGTAAAGACTGCCA | EcoRI |
TAGGATCCCTTTGGGGTAATTTCT | BamHI | |
Downstream | ACGTCGACAAGTAAATCAAGACCA | SalI |
ACCAAGCTTAATGTTTTCCACTTGG | HindIII | |
kna | TCGGATCCAGTCAGCAACCATAGT | BamHI |
ATGTCGACCCGCTCAGAAGAACT | SalI | |
RT-PCR | ||
spkC(slr0599) | CAGTTTGGGACTAACGGC | |
TAAACCTTGGTGGCTTGG | ||
spkD(sll0776) | CACTAGGGGATTTATGG | |
TTGGTGGAACTTCTCGT | ||
spkF(slr1225) | TCTTAGTTTCGTCCACGG | |
ACCCTGATTGCCTTTACC | ||
spkG(slr0152) | TTACTTGCCCCCATTGT | |
CTCCCTGGATTAAGAGGC | ||
rnp(slr1469) | GGACTACCCAAAACACTGC | |
CAATAATCCCAGCTTGGCT |