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. 2011 May 26;6(5):e20059. doi: 10.1371/journal.pone.0020059

Figure 11. Agreement between top affinity K-mers and JASPAR sequence logos.

Figure 11

Shown at the top of the figure are JASPAR Core sequence logos for four TFs. Visible below the sequence logos are the top five highest affinity K-mers from the linear model, for all four TFs. An arrow and the characters “RC” indicate reverse complement K-mers. All sequence logos are for Mus musculus, and were downloaded from JASPAR.