Table 1. Known human miRNAs simultaneously mapped to other ncRNAs.
MiPred score (%) | miRNA | Length (nt) | Mismatch | ncRNA (No.) | Same? |
73.1 | miR-1291 | 24 | 0 | snoRNA (AJ609443) | Yes |
61.2 (Pseudo) | miR-1246 | 19 | 0 | snRNA (X59360) | No |
70.9 | miR-1248 | 27 | 0 | snoRNA (AM055745) | Yes |
71.0 | miR-1274b | 17 | 0 | tRNA (U00939) | No |
Not_hairpin | miR-1973 | 19 | 0 | rRNA (DQ304955) | No |
73.6 (Pseudo) | miR-4284 | 18 | 0 | tRNA (AP008562) | No |
61.7 (Pseudo) | miR-3656 | 17 | 0 | rRNA (HSU13369) | No |
66.7 | miR-1290 | 19 | 1 | snRNA (HUMUG21) | No |
62.1 (Pseudo) | miR-1274a | 18 | 1 | tRNA (U00939) | No |
Not_hairpin | miR-1322 | 19 | 1 | snoRNA (AC011292) | No |
57.9 | miR-3182 | 17 | 1 | tRNA (X17513) | No |
66.6 (Pseudo) | miR-3196 | 18 | 1 | rRNA (HUMRGM) | No |
“Not_hairpin” indicates that the pre-miRNA (for example, hsa-mir-1973) is not a pre-miRNA-like hairpin according to the miPred web server; “Pseudo” indicates that the pre-miRNA is predicated as a pseudo miRNA precursor; “Same?” indicates whether the miRNA precursors and other ncRNAs have the same sequence.