TABLE 1.
Buffer and nucleotide effects on the critical concentration for polymerization of bacterial tubulin
Nucleotide concentrations were 1 mm for GTP and GDP and 0.1 mm for GMPCPP, GMPCP, and GTPγS. ND, not determined.
Buffer | Nucleotide | Cr | ΔGapp0a |
---|---|---|---|
μm BtubA/B | kcal mol−1 | ||
Tris-KCl | GTP | 2.05 ± 0.32b | −7.76 ± 0.10 |
GDP | >20b | >−6.41 | |
GMPCPP | 0.99 ± 0.20b | −8.19 ± 0.12 | |
GMPCP | >10b | >−6.82 | |
GTPγS | 2.11 ± 0.26b | −7.74 ± 0.07 | |
Tris-NaCl | GTP | 10 < Cr < 20c | ND |
Tris-KGlu | GTP | 0.94 ± 0.10b0.76 ± 0.10c | −8.22 ± 0.06 |
Tris-KGlu | GDP | >10c | ND |
Tris-0.2 m KCl | GTP | 2.32 ± 0.30b | −7.69 ± 0.08 |
Pipes | GTP | 10 < Cr < 20c | ND |
GMPCPP | 10 < Cr < 30c | ND | |
Pipes-D2O | GTP | 6 ± 1b,c | −7.2 ± 0.2 |
Pipes-0.2 m KCl | GTP | <14c | ND |
Pipes-0.2 m NaCl | GTP | 20 < Cr < 40c | ND |
HMK | GTP | <10, aggregatesc | ND |
a Apparent elongation free energy changes calculated from the sedimentation Cr values (ΔGapp0 = RT lnCr−1).
b Determined by sedimentation at 25 °C.
c Determined by light scattering at 30 °C.