Table 3. Screening of circular-permutated mKate variants in E.coli.
Variant * | Colony brightness 24 h at 37°C (% of mKate) | Colony brightness 72 h at 2–8°C (% of mKate) |
mKate | 100 | 100 |
pRSET-A | 0 | 0 |
cp139-138a | 0 | 0 |
cp140-139a | 0 | 0 |
cp141-140a | 0 | 0 |
cp144-143a | 0 | 0 |
Loop 7-8 region and flanking sites | ||
cp148-147 | 0 | 0 |
cp149-148 | 1.1 | 32.3 |
cp150-149 | 0.2 | 11.7 |
cp151-150b | 7.5 | 28.4 |
cp152-151 | 5.1 | 21.4 |
cp153-152 | 2.9 | 20.8 |
cp154-153 | 10.9 | 19.4 |
cp155-154 | 0 | 0 |
cp156-155 | 0 | 0 |
Loop 8–9 region and flanking sites | ||
cp164-163 | 0 | 0 |
cp165-164 | 1.9 | 13.2 |
cp166-165 | 10.2 | 24.7 |
cp167-166c | 6.6 | 21.6 |
cp168-167 | 3.6 | 22.2 |
cp169-168 | 1.6 | 16.3 |
cp170-169 | 0 | 0 |
Loop 9–10 region and flanking sites | ||
cp180-179 | 0 | 0 |
cp181-180 | 0 | 0 |
cp182-181 | 11.5 | 12.6 |
cp183-182 | 23.7 | 30.0 |
cp184-183 | 18.7 | 28.4 |
cp185-184 | 9.7 | 17.5 |
cp186-185 | 21.2 | 27.7 |
cp187-186 | 26.7 | 30.8 |
cp188-187 | 9.9 | 19.7 |
cp189-188d | 33.9 | 55.2 |
cp190-189 | 12.1 | 18.3 |
cp191-190 | 8.3 | 15 |
cp192-191 | 0.4 | 6 |
cp193-192 | 0 | 0 |
cp194-193 | 0 | 0 |
The circularly permuted variants are labeled with the new amino and carboxy termini.
Align to cp-EGFP in GCaMP2.
Aligns to cp-mCherry159-158.
Aligns to cp-mCherry 175-174.
Aligns to cp-mCherry194-193.