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. Author manuscript; available in PMC: 2012 May 1.
Published in final edited form as: J Insect Physiol. 2011 Feb 17;57(5):620–627. doi: 10.1016/j.jinsphys.2011.02.003

Table 1.

Primers used for cloning, probe production, and qPCR.

Primer sequence Purpose Amplicon size Efficiency for qPCR(%)
CPP2: (forward)
5 '-GAAGGTTCACTGT/CTGAAA/GGT-3'
For cDNA internal fragment 174 bp ---
CPP3: (reverse)
5'-GTTACTT/CTTGGCA/GAA TTCC-3'
CPP4: (reverse)
5'-CGTACACCTTGCTGTAGATCCT-3'
For 5'-RACE --- ---
CPP5: (forward)
5'-TTCGTCACGTTCAGCACACGGT-3'
For 3'-RACE --- ---
CPP8: (forward)
5'-TCAGTACACAGTCCATCAACGG-3'
For hybridization probe 567 bp ---
CPP9: (reverse)
5'-TACCTAGGTGTCCAGCAGTAAG-3'
*qRPL19P1 (forward)
5'-GCTTTGTTTGATCGTGTGTGA-3'
For rpl19 qPCR 105 bp 101.4
*qRPL19P2 (reverse)
5'-AACATATCTCCCCCAATCCAG-3'
*q28SP1 (forward)
5'-ACGTGAAACTGCCTAGGGCTC-3'
For 28SrRNA qPCR 200 bp 97.8
*q28SP2 (reverse)
5'-TGGGACAAGCAACCAGATG-3'
*qCPOP1 (forward)
5'-TTCGTCACGTTCAGCACACGGT-3'
For cpo qPCR 119bp 102.4
*qCPOP2 (reverse)
5'-GTGTTACTCTTGGCGAATTCC-3'
qRPL40P1 (forward)
5'-ACTGCCGCAAGAAGAAGTGT-3'
For rpl40 qPCR 104 bp 98.2
qRPL40P2 (reverse)
5'-GGAATCAATCCAGAAGCACAA-3'
*

indicates that the primer sequence was previously reported in Zhang and Denlinger (2011).