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. Author manuscript; available in PMC: 2012 Feb 1.
Published in final edited form as: J Mol Graph Model. 2010 Dec 13;29(5):663–675. doi: 10.1016/j.jmgm.2010.12.002

Fig. 5.

Fig. 5

Typical conformations at temperature 0.08. (a) A crystal structure of RBP, (b) core conformations of RBP at 10 millionth step with MJ and (c) with KD implicit solvent models. (d) A structure of RGS4, (e) core conformations of RGS4 at 10 millionth step with MJ and (f) with KD. α-helix is colored purple, β-strand yellow, 3–10 helix blue, turn cyan, and coil white in (a, d). (b,c,e,f) are stereo images. Black trace shows core of the known structures. Green and pink traces show the core at 10 millionth step, each averaged over five trajectories.