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. 2010 Aug 19;5(2):252–261. doi: 10.1038/ismej.2010.126

Table 1. Annotation of the B. rhizoxinica T3SS gene cluster.

ORF Gene Proposed function R. solanacearum homolog Percent identity (BLASTP)
1 sctC Outer membrane ring (secretin) hrcC 41
2 hrpB Regulator hrpB 37
3   Unknown  
4   Unknown  
5 sctT Inner membrane protein hrcT 43
6 sctO Unknown hrpD
7 sctN ATPase hrcN 71
8 sctL ATPase-associated regulator hrpF 31
9 sctK Unknown hrpH
10 sctJ Inner membrane ring (lipoprotein) hrcJ 58
11 sctI Unknown hrpJ
12 sctG Unknown hrpK
13 sctU Inner membrane protein hrcU 47
14 sctV Inner membrane protein hrcV 59
15 hpaP Unknown hpaP 35
16 sctQ Putative cytosolic ring hrcQ 29
17 sctR Inner membrane protein hrcR 63
18 sctS Inner membrane protein hrcS 59
19   Pilus assembly hrpV
20 sctD Inner membrane ring hrpW 26
21 sctE Pilus assembly hrpX
22 sctF Pilus hrpY
23 hpaB Unknown hpaB 56