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. Author manuscript; available in PMC: 2011 Dec 1.
Published in final edited form as: Mitochondrial DNA. 2010 Dec;21(6):191–197. doi: 10.3109/19401736.2010.528756

Table 3.

Primer-specific optimized filter metrics. The values below are the primer specific filter metrics for each of the eight sequencing primers defined by our laboratory’s internal validation. These values should be used as initial settings for a laboratory. Internal validation should be performed by individual laboratories to define its laboratory-specific settings.

Trace Score Contiguous Read Length
Primer Low Quality Review High Quality Low Quality Review High Quality
R1 0-20 21-29 30-100 0-200 201-250 ≥251
B1 0-20 21-27 28-100 0-150 151-210 ≥211
C1 0-20 21-24 25-100 0-150 151-250 ≥251
R2 0-20 21-24 25-100 0-110 111-250 ≥251
A4 0-20 21-24 25-100 0-200 201-250 ≥251
B4 0-20 21-24 25-100 0-150 151-200 ≥201
C2 0-20 21-24 25-100 0-100 101-150 ≥151
D2 0-20 21-24 25-100 0-100 101-150 ≥151