Table 3.
Primer-specific optimized filter metrics. The values below are the primer specific filter metrics for each of the eight sequencing primers defined by our laboratory’s internal validation. These values should be used as initial settings for a laboratory. Internal validation should be performed by individual laboratories to define its laboratory-specific settings.
Trace Score | Contiguous Read Length | |||||
---|---|---|---|---|---|---|
Primer | Low Quality | Review | High Quality | Low Quality | Review | High Quality |
R1 | 0-20 | 21-29 | 30-100 | 0-200 | 201-250 | ≥251 |
B1 | 0-20 | 21-27 | 28-100 | 0-150 | 151-210 | ≥211 |
C1 | 0-20 | 21-24 | 25-100 | 0-150 | 151-250 | ≥251 |
R2 | 0-20 | 21-24 | 25-100 | 0-110 | 111-250 | ≥251 |
A4 | 0-20 | 21-24 | 25-100 | 0-200 | 201-250 | ≥251 |
B4 | 0-20 | 21-24 | 25-100 | 0-150 | 151-200 | ≥201 |
C2 | 0-20 | 21-24 | 25-100 | 0-100 | 101-150 | ≥151 |
D2 | 0-20 | 21-24 | 25-100 | 0-100 | 101-150 | ≥151 |