Table 1. Nine mutations beneficial to the ssDNA bacteriophage ID11.

Label	Protein function	Protein name	Aa position	Aa	Nuc position	Nuc
A	DNA binding	J	15	AV	2520	CT
B	DNA binding	J	20	VL	2534	GT
C	coat	F	3	VF	2609	GT
D	coat	F	314	AV	3543	CT
E	coat	F	322	NS	3567	AG
F	coat	F	355	PS	3665	CT
G	coat	F	416	MI	3850	GA
H	coat	F	419	TA	3857	AG
I	coat	F	421	DG	3864	AG

The nine beneficial mutations used in this study affect two different viral proteins: the DNA binding protein J and the major coat protein F. Positions are based on the published genome sequence of ID11 (GenBank accession # AY751298). Nuc, nucleotide; Nuc, nucleotide change.