Table 3.

Polymorphism and Divergence for Silent and Replacement Sites in Humans and Chimpanzees.

	Human Polymorphism		Human–Macaque Divergence				Chimpanzee Polymorphism		Chimpanzee–Macaque Divergence
Gene	R	S	R	S	NIa	P	R	S	R	S	NIa	P
TLR1	9	5	35	25	1.29	0.77	6	1	35	26	4.46	0.23
TLR2	5	5	33	30	0.91	1	3	5	35	35	0.60	0.7
TLR3	3	2	42	47	1.68	0.67	2	1	48	48	2.00	1
TLR4	5	3	51	30	0.98	1	1	1	53	30	0.57	1
TLR5	10	5	40	32	1.60	0.56	3	1	45	33	2.20	0.64
TLR6	7	6	31	42	1.58	0.54	3	2	36	43	1.79	0.65
TLR7	2	4	23	34	0.74	1	1	0	23	33	n/a	0.43
TLR8	2	9	33	37	0.25	0.1	0	5	32	40	0.00	0.074
TLR9	5	1	47	76	8.09	0.08	4	2	51	82	3.22	0.43
TLR10	13	9	27	31	1.66	0.45	2	1	24	29	2.42	0.59
Viral	12	16	145	194	1.00	1	7	9	154	203	1.15	0.79
Nonviral	49	33	217	190	1.30	0.33	18	11	228	196	1.41	0.43
ALL	61	49	362	384	1.32	0.18	25	19	382	399	1.37	0.36

^aNI = (R/S)_pol/(R/S)_div.