Table 1.
Sample | A. Standard gels apparent size range (bp) | B. Formamide gels apparent size range (bp) | C. (CG)7-8 allele sequence length (bp) | D. (CG)5 allele sequence length (bp) | ||
---|---|---|---|---|---|---|
varying allele | stable allele | varying allele | stable allele | |||
1 | 145–153 | 145 | 145–155 | 145 | 155 (153, 151)a | 145 |
2 | 150–153 | 153 | 150–155 | 153 | 155 | 153 |
3 | 149–152 | 149 | 149–155 | 149 | 155 | 149 |
Apparent sizes of the variable- and stable-mobility alleles in the three individuals heterozygous for variable-mobility alleles are shown, as determined using standard (column A) and 40% formamide (column B) gels. Three control individuals without variable-mobility alleles were also typed as references. The relative mobility of their alleles did not change (see Fig. 1 for examples). The length of the (CG)7–8 and (CG)5 alleles, as determined by sequencing, are also shown. The variable-mobility allele present in sample 1 appeared to be 145 bp in size only twice and never electophoresed so rapidly in either sample 2 or 3; as this individual has a stable allele of 145 bp, this result may be due to lack of PCR of this allele in these two instances.
Due to variation in number of repeats in the sequenced clones of this allele, the allele length is uncertain but most likely is 155 bp.