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. 1999 Sep;9(9):830–838. doi: 10.1101/gr.9.9.830

Table 1.

Allele Mobility in Standard and 40% Formamide Gels

Sample A. Standard gels apparent size range (bp) B. Formamide gels apparent size range (bp) C. (CG)7-8 allele sequence length (bp) D. (CG)5 allele sequence length (bp)





varying allele stable allele varying allele stable allele




1 145–153 145 145–155 145 155 (153, 151)a 145
2 150–153 153 150–155 153 155 153
3 149–152 149 149–155 149 155 149

Apparent sizes of the variable- and stable-mobility alleles in the three individuals heterozygous for variable-mobility alleles are shown, as determined using standard (column A) and 40% formamide (column B) gels. Three control individuals without variable-mobility alleles were also typed as references. The relative mobility of their alleles did not change (see Fig. 1 for examples). The length of the (CG)7–8 and (CG)5 alleles, as determined by sequencing, are also shown. The variable-mobility allele present in sample 1 appeared to be 145 bp in size only twice and never electophoresed so rapidly in either sample 2 or 3; as this individual has a stable allele of 145 bp, this result may be due to lack of PCR of this allele in these two instances. 

a

Due to variation in number of repeats in the sequenced clones of this allele, the allele length is uncertain but most likely is 155 bp.