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Percentage of instances excluded by preprocessing, for d = dopt - 1.
| data set | first (5 species) | second (43 species) | ||||||
|---|---|---|---|---|---|---|---|---|
| number of sequences k | 20 | 30 | 40 | 50 | 4 | 6 | 8 | 10 |
| naïve kernel (%) | 81.3 | 82.2 | 85.0 | 86.1 | 92.9 | 68.4 | 56.6 | 50.0 |
| our preprocessing, from remaining (%) | 100 | 100 | 96.2 | 100 | 94.3 | 89.6 | 87.7 | 90.6 |
| total excluded instances (%) | 100 | 100 | 99.4 | 100 | 99.6 | 96.7 | 94.7 | 95.3 |
