Table 2.
R2 (D′) | SNP | Frequency (%) | |||||
---|---|---|---|---|---|---|---|
0·25(0·67) | 0·19(0·75) | −852A>G | AA (75·7) |
AG (22·0) |
GG (2·3) |
||
0·52(0·92) | −420C>G | CC (46·1) |
CG (44·1) |
GG (9·8) |
|||
+157C>T | CC (61·3) |
CT (33·1) |
TT (5·6) |
Each SNP was in Hardy–Weinberg equilibrium (P = 0·32, 0·96 and 0·16 for −852, −420 and +157, respectively). Pairwise LD between SNPs was estimated using Haploview Version 3·32 (Broad Institute http://www.broad.mit.edu/mpg/haploview).