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. Author manuscript; available in PMC: 2011 Jun 6.
Published in final edited form as: Stat Med. 2008 Jul 10;27(15):2784–2801. doi: 10.1002/sim.3051

Table II.

Estimated haplotype frequencies by race/ethnicity.

ApoCIII
Estimated frequency
− (rs2854117) −455 T/C (rs2854116) Intron 1 (466) G/C (rs2070669) Gly34Gly C/T (rs4520) Exon 4 SstI 4348(5) C/G (rs5128) White Black Hispanic
4 C C G C C 0.12 0.15 0.045
5 C T C C C 0.016 0.049
6 C T C T C 0.030 0.033
6 C T C T G 0.057
7 C T G C C 0.46 0.11 0.35
8 C T G T C 0.10 0.063 0.18
9 T C C C C 0.12 0.57 0.21
10 T C C T C 0.034 0.013
11 T C C T G 0.082 0.071 0.17
12 T C G C C 0.017 0.019
ApoE
Estimated frequency
Arg112Cys (rs429358) Arg158Cys (rs7412) White Black Hispanic
1 C C 0.15 0.21 0.14
2 T C 0.78 0.71 0.83
3 T T 0.075 0.073 0.032
EL
Estimated frequency
rs12970066 Asn396Ser rs3829632 (−1309A/G) White Black Hispanic
1 A C A 0.49 0.74 0.46
2 A C G 0.013
3 A G A 0.29 0.22 0.21
4 G C A 0.20 0.33
HL
Estimated frequency
rs2070895 rs12595191 rs690 rs6084 White Black Hispanic
1 A A T G 0.014
2 A A T T 0.012 0.022
3 A G C G 0.091 0.16 0.27
4 A G C T 0.12 0.18 0.11
5 A G T G 0.017 0.045 0.049
6 A G T T 0.16 0.016
7 G A C G 0.057 0.012 0.035
8 G A C T 0.075 0.053
9 G A T G 0.022
10 G G C G 0.17 0.085 0.13
11 G G C T 0.33 0.14 0.21
12 G G T G 0.066 0.13 0.037
13 G G T T 0.060 0.058 0.049

Note: — Indicates estimated frequency < 0.01. Haplotypes with estimated frequencies of less than 0.01 in all three racial/ethnic groups are not presented in this table but are included in the analysis.