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. Author manuscript; available in PMC: 2011 Jun 7.
Published in final edited form as: SIAM J Sci Comput. 2011 Jan 1;33(2):826–848. doi: 10.1137/090764645
ε(z) dielectric coefficient at z
qk charge of the atom k
zk location of charge qk
nc number of point charges
λ(z) characteristic function of the set ℝ3 \ Ω
ec charge of an electron
kB Boltzmann’s constant
T absolute temperature
𝕀=12icizi2
ionic strength
ci, zi concentration and charge of ith ionic species
κ¯(z)=8πec2𝕀(z)kBT
modified Debye-Huckel parameter
nd number of basis functions
nq number of quadrature points
nb number of molecular surface mesh patches