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. 2011 Feb 9;19(6):667–671. doi: 10.1038/ejhg.2010.257

Table 1. Regions of extreme sharing identified by SGS.

Chomosome numbers Position (MB) (NCBI b36/hg18) Size (cM) Methods Genes in the region
CEU          
Chr 1 35.449 35.717 0.075 iHS, CLR, XP-EHH ZMYM4, KIAA0319 L
Chr 1 143.67 143.841 0.485 novel PDE4DIP, SEC22B
Chr 5 109.638 110.131 0.115 CLR, XP-EHH, CMS TMEM232, SLC25A46
Chr 7 151.348 151.774 0.132 XP-EHH GALNT11, MLL3, FABP5P3
Chr 10 74.416 75.139 0.138 CLR, CMS P4HA1, ECD, NUDT13, FAM149B1, MRPS16, TTC18, ANXA7, ZMYND17, PPP3CB, SYNP02L, AGAP5
Chr 18 64.802 64.963 0.186 CLR, XP-EHH CCDC102B
Chr 21 10.024 13.458 0.6 XP-EHH BAGE2, BAGE
YRI          
Chr 1 143.67 143.755 0.219 novel PDE4DIP
Chr 21 0.019 0.064 0.637 novel TPTE, BAGE2, BAGE
ASN          
Chr 1 92.605 92.94 0.091 iHS RPAP2, GFI1, EVI5
Chr 1 103.215 103.416 0.079 iHS, CLR COL11A1
Chr 2 17.421 17.897 0.149 XP-EHH VSNL1, SMC6, GEN1
Chr 2 72.211 73.016 0.278 CLR, XP-EHH CYP26B1, EXOC6B, SPR, EMX1
Chr 2 177.337 177.599 0.217 XP-EHH  
Chr 3 25.905 26.376 0.386 iHS, XP-EHH  
Chr 3 48.665 49.708 0.04 CLR CELSR3, PRKAR2A, NCKIPSD, IP6K2, SLC25A20, P4HTM, WDR6, DALRD3, NDUFAF3 IMPDH2, QRICH1, QARS LAMB2, CCDC71, KLHDC8B, CCDC36, USP4, GPX1, RHOA AMT, TCTA, DAG1, APEH, BSN MST1, RNF123
Chr 5 117.375 117.697 0.183 CLR, XP-EHH  
Chr 7 142.266 142.397 0.192 novel EPHB6, TRPV6, TRPV5, KEL
Chr 15 61.568 62.069 0.339 CLR, XP-EHH USP3, FBXL22, HERC1, DAPK2
Chr 18 30.411 30.602 0.172 CLR DTNA

The iHS result is from the study of Voight et al4 and HapMap II.15 The CLR result is from the study of Williamson et al10 and Pickrell et al6 The XP-EHH result is from the study of Sabeti et al12 and Pickrell et al6 The CMS result is from the study of Grossman et al.13

All of regions are identified in the same population as in the cited literature. The underlined genes have previously been identified to be associated with human disease or trait. The genomic positions are according to NCBI Build 36/UCSC hg18. The centimorgan distance was calculated based on HapMap provided recombination rate and distance.