Table IV.
Residue | <ΔEDirect electrostatic> | <ΔGPolar desolvation> | TotalElectrostatic | <ΔEvan der Waals> | <ΔGNon-polar desolvation> | <ΔGBinding> |
---|---|---|---|---|---|---|
Glycan | ||||||
GlcNAc | 2.9 | −1.5 | 1.4 | −2.3 | −0.3 | −1.2 |
Gal | −30.2 | 19.6 | −10.6 | −5.0 | −1.3 | −16.9 |
Neu5Ac | −6.3 | 11.5 | 5.2 | −8.4 | −1.7 | −4.9 |
Total | −33.6 | 29.6 | −4.0 | −15.7 | −3.2 | −22.9 |
Protein | ||||||
Ser32 | −9.5 | 5.5 | −4.1 | −0.1 | −0.1 | −4.3 |
Lys31 | −24.3 | 24.3 | −0.1 | −2.7 | −0.3 | −3.1 |
Gly75 | −3.0 | 2.0 | −0.9 | −1.7 | −0.3 | −3.0 |
Tyr87 | −1.0 | 1.8 | 0.8 | −3.1 | −0.3 | −2.6 |
Ile85 | −1.1 | 0.9 | −0.2 | −1.8 | −0.1 | −2.1 |
His76 | −3.4 | 2.7 | −0.6 | −1.2 | −0.2 | −2.1 |
Ala74 | −2.2 | 1.8 | −0.3 | −1.5 | −0.1 | −2.0 |
Asn94 | −1.3 | 0.0 | −1.3 | −0.4 | 0.0 | −1.8 |
Asp72 | −4.0 | 1.2 | −2.8 | 2.1 | 0.0 | −0.7 |
Asn30 | −1.2 | 2.1 | 0.8 | −1.2 | −0.2 | −0.6 |
Asp34 | 15.8 | −12.9 | 2.9 | −0.2 | 0.0 | 2.8 |
Subtotal | −35.2 | 29.4 | −5.8 | −11.7 | −1.9 | −19.3 |
Percent of Totalb | 104.8 | 102.8 | 116.6 | 74.5 | 83.5 | 84.5 |
aAny residue indentified in the hydrogen-bonding analysis or that contributes >1 kcal mol−1 to <ΔGBinding>.
bRelative to the total contributions from all of the residues in the protein.