Table 3.
Probes and Primers
| SNP | Probesa | Primersb |
|---|---|---|
| eNOSE298D | CCCCAGATGAGCCCCCAGAACT | CGGTCGCTTCGACGTGCT |
| CCCCAGATGATCCCCCAGAACTC | CCAGTCAATCCCTTTGGTGCT | |
| CYP11B15 | TCTCCCAGTACCCGCTCTGCCCA | TACACAGCCTCAACCTGGCC |
| TCTCCCAGTACCGGCTCTGCCCA | GGCCTGCATGTTTCCTGGA | |
| WIAF2065 | AACAAGCTTTCCACTCCCACTTCCCT | CAAGCATTTGTCTTAATTTACAGACATTAA |
| ACAAGCTTTCCGCTCCCACTTCC | GTGGATGAAGAGGTTGAGGTGATA | |
| WIAF896 | CCAAAATTCCGAGTCCCTTGGCT | TCTGCCTATAGCTTGGATATCTTAATCTCT |
| CAGCCAAAATTCCTAGTCCCTTGGCT | CTGAGAGGTTTTGGAATGACTTGAA | |
| WIAF610 | TCTGGGTATGTGACATGCCTGCTCC | ACTCTGAATTATGGCAGTAGGCAAA |
| TGGGTATGTGACGTGCCTGCTCC | CTTGAGAGAACTCATCATTTAAAAATGTGT | |
| WIAF2042 | TCTATCTCTAAGGGGAGTCTCAAAACCCCA | TGAGCACATTTCTTGGGTCTGTT |
| TCTATCTCTAAGGGCAGTCTCAAAACCCCA | ||
| WIAF1161 | CATTATGTGGACTGAACCGACTTTTCTAAAGC | ATGAGCATTAGCTACTTTTCAGAATTGA |
| CATTATGTGGACTGAATCGACTTTTCTAAAGCT | TGTTGCAAAAGGAAAGAAAAGCTT | |
| C | ||
| WIAF2566 | TGTGCATAGTATCCATTAGTTTTTCATGATCCA | ACTCAGAAGGGTCATGGGTGA |
| TGTGCATAGTATCCAGTAGTTTTTCATGATCCA | GCTTCTAGGGTATCCATCTCCCTAGTA | |
| WIAF335 | TGTTAACAATTTTGGGCAGCCGAACT | GGATGTTGCATAAATTCAGGTTCTTT |
| TGTTAACAATTTTTGGCAGCCGAACTC | ATGTGCGTTTGTAGACAGCATCA |
a
Probes used in the TaqMan assay. The SNP is underlined.
b
Forward and reverse primers for each TaqMan assay, with the forward primer listed first. Sequences for the SNPs prefixed WIAF were obtained from the Whitehead Institute Web site (http://www-genome.wi.mit.edu).