Table 3.
Virus | PanRHV2a | |||
---|---|---|---|---|
% Nucleotide and amino acid sequence identity on | ||||
454bp | 1168bp | |||
Nucleotide | Amino acid | Nucleotide | Amino acid | |
KSHV | 63 | 73 | 66 | 74 |
PanRHV1a | 62 | 72 | ||
PtRV1b | 67 | 75 | ||
PanRHV1b | 64 | 71 | ||
GorRHV1 | 63 | 70 | ||
RFHVMn | 62 | 70 | 66 | 73 |
RFHVMm | 63 | 68 | 67 | 73 |
MndRHV1 | 64 | 69 | ||
ChRV1 | 60 | 68 | 66 | 73 |
ChRV2 | 66 | 76 | ||
MndRHV2 | 67 | 74 | ||
MneRV2 | 67 | 76 | 71 | 79 |
MGVMn | 67 | 76 | ||
MGVMf | 67 | 75 | ||
MGVMm | 67 | 74 | ||
RRV | 67 | 74 | 71 | 78 |
HVS | 60 | 68 | 64 | 71 |
HVA3 | 60 | 66 | 64 | 70 |
EBV | 57 | 59 | 61 | 60 |
PanRHV2 strain accession no. AF346490.
The comparison with the PtRV1 strain was performed only on the common 967-bp fragment.