Table 1.
L1 name | Accession # | GI # | Databasea | Coordinatesb | Intact ORF1/ORF2 | # full length monomersc | # truncated monomersc | % identity with body consensusd | Active w/wo CMV promoter |
---|---|---|---|---|---|---|---|---|---|
GF13 | AF146793 | 7684609 | nr | 114636–121199 | Y/Y | 2.2 | 2 | 99.5 | Y/N? |
GF21 | AC021631 | 13310926 | htgs/nr | 68991–62229 | Y/Y | 3.3 | 2 | 99.5 | Y/Y |
GF23 | AF229843 | 6862583 | nr | 42031–48206 | N/Y | 0.7 | 1 | 98.6 | |
GF26 | AC002406 | 2981248 | nr | 19967–26229 | N/N | 1.2 | 1 | 96.1 | |
GF27 | AC026767 | 12643015 | htgs/nr | 118223–110609 | N/Y | 2.2 | 2 | 99.4 | N/N? |
GF36 | AC003996 | 2772523 | nr | 20312–27252 | Y/N | 1.4 | 3 | 96 | |
GF43 | AL450393 | 11876100 | htgs | 7656–13977 | Y/Y | 1.1 | 2 | 99.6 | |
GF46 | AL049866 | 7630118 | nr | 22185–15089 | Y/N | 5.1 | 1 | 99.3 | |
GF56 | AC058786 | 11120825 | nr | 200048–206662 | Y/N | 2.4 | 2 | 99.6 | |
GF62 | AC068252 | 13357510 | htgs | 161311–154202 | Y/Y | 6.1 | 1 | 99.6 | Y/Y |
GF68 | AC006508 | 4454569 | nr | 167020–160414 | N/N | 2.2 | 2 | 97.7 | |
GF71 | AC079221 | 10122065 | htgs | 58136–64915 | Y/N | 1.1 | 1 | 98.4 | |
GF78 | AC007978 | 12000475 | nr | 42762–49862 | Y/N | 5.1 | 1 | 99.4 | |
GF82 | AC083912 | 10697433 | htgs | 925–7430 | Y/Y | 2 | 2 | 99.2 | |
GF84 | AC087134 | 11610860 | htgs | 179278–172998 | N/N | 1.7 | 0 | 92.6 | |
GF251 | AF259071 | 8571430 | nr | 61240–55080 | Y/N | 1.1 | 0 | 96.4 | |
GF253 | AF259073 | 8575573 | nr | 6526–256 | Y/N | 1.7 | 0 | 93.4 |
Database refers to the non-redundant or high-throughput genomic sequence databases of GenBank.
Coordinates are the first and last nucleotides in the GenBank record delimiting the L1.
See Figure 1B for description of monomer structure.
Identity with GF consensus sequence beginning 250 bp upstream of the start of ORF1.