Table 1.
Identified algae MIPs
| Organism | Ver.a | Nameb | GI numberc | Gene Modeld | Comment |
|---|---|---|---|---|---|
| Chlamydomonas reinhardtii | 4.0 | CrMIPD1;1 | 159471952 | au5.g4049_t1 | Previously CrMIP1 |
| CrMIPD2;1 | 159466961e | - | Previously CrMIP2 | ||
| Volvox carteri | 1.0 | VcMIPD1;1 | e_gw1.60.83.1 | ||
| VcMIPD2;1 | - | ||||
| VcMIPD4;1f | fgenesh4_pg.C_scaffold_32000076 | ||||
| Coccomyxa C-169g | 2.0 | CcMIPA1;1 | - | ||
| CcMIPD 1;1 | - | ||||
| CcMIPD3;1 | - | ||||
| CcPIP4;1 | - | ||||
| CcPIP4;2 | - | ||||
| CcGIP1;1 | - | ||||
| Chlorella NC64A | 1.0 | CnMIPD1;1 | IGS.gm_19_00211 | ||
| CnMIPE1;1 | - | ||||
| CnMIPE1;2 | - | ||||
| CnMIPE1;3 | - | Gap after exon 4 | |||
| CnGIP1;1 | - | Gap before ex7 | |||
| Micromonas pusilla CCMP1545 | 2.0 | MpMIPC1;1 | - | ||
| Micromonas RCC299 | 3.0 | MrMIPC1;1 | EuGene.0900010614 | ||
| Ostreococcus lucimarinus | 2.0 | OlMIPB1;1 | 145352492 | estExt_fgenesh1_pg.C_Chr_120034 | EST |
| Ostreococcus RCC809 | 2.0 | OrMIPB1;1 | EuGene.1100010007 | ||
| OrMIPE1;1 | estExt_Genewise1Plus.C_chr_30268 | EST | |||
| Ostreococcus tauri | 2.0 | OtMIPC1;1f | 0400010048 | ||
a)Genome version at JGI [14] used for annotation b)Name used for MIP in this paper c)GI number for sequence in GenBank [16] if existing d)Name of gene model for MIP at JGI [14] if existing e)The GI number refer to a gene model with shorter 5'-end f)These two MIPs were found when rechecking the genomes for MIPs and are therefore not included in the phylogenetic analysis presented in this article. Vc_MIPD2_1 does not start with methionine g)Previously classified as Chlorella vulgaris C-169