Table 4.
Sequence retrieval of 19 DMTs in plants
| A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Zma | 119 | 106 | 8 | 75 | 13 | 0 | 16 | 1 | 12 | 17 | 1 | 2 | 0 | 0 | 7 | 0 | 0 | 5 | 0 |
| Osa (jp) | 106 | 67 | 7 | 41 | 5 | 0 | 12 | 1 | 20 | 8 | 1 | 0 | 0 | 0 | 4 | 0 | 0 | 3 | 0 |
| Osa (in) | 190 | 102 | 12 | 64 | 13 | 0 | 23 | 1 | 38 | 21 | 1 | 0 | 0 | 0 | 7 | 0 | 0 | 3 | 0 |
| Vvi | 126 | 71 | 18 | 57 | 22 | 1 | 19 | 0 | 34 | 19 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| Ptr | 110 | 70 | 5 | 48 | 10 | 0 | 13 | 1 | 24 | 21 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 |
| Psi | 24 | 15 | 1 | 10 | 2 | 0 | 0 | 0 | 8 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| Ppa | 47 | 34 | 2 | 34 | 4 | 0 | 5 | 1 | 11 | 12 | 2 | 0 | 0 | 0 | 3 | 0 | 0 | 2 | 1 |
| Olu | 22 | 21 | 3 | 17 | 5 | 0 | 1 | 0 | 8 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| Ota | 22 | 23 | 2 | 20 | 2 | 0 | 1 | 0 | 6 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Table lists number of full-length sequences found in Pfam full sequence data, using the organisms in [additional file 16: supplementary table S12]: Zma = Zea mays; Osa = Oryza sativa (subsp. japonica/indica); Vvi = Vitis vinifera; Ptr = Populus trichocarpa; Psi = Picea sitchensis; Ppa = Physcomitrella patens; Olu = Ostreococcus lucimarinus; Ota = Ostreococcus tauri. The DMT families are represented by letters: EamA (A); TPT (B); DUF914 (C); UAA (D); NST (E); DUF1632 (F); DUF803 (G); UPF0546 (H); Zip (I); Cation (J); CRCB (K); CRT-like (L); DUF486 (M); DUF606 (N); FAE (O); MDR (P); RhaT (Q); SugT (R); UPF0060 (S).