Table 2.
Means and standard deviations of the untransformed skatole levels (ng/g of fat) for selected significant SNP markers on SSC6
| SNP | Genotype | N | Mean | Standard Deviation | Explained phenotypic variance |
|---|---|---|---|---|---|
| TT | 224 | 74.7 | 78.0 | ||
| MARC0019446 | GT | 457 | 89.1 | 90.5 | 0.06 ± 0.06 |
| GG | 185 | 114.6 | 125.1 | ||
| GG | 507 | 78.9 | 85.6 | ||
| ALGA0107039 | GT | 335 | 101.8 | 100.5 | 0.19 ± 0.16 |
| TT | 39 | 181.7 | 174.0 | ||
| AA | 496 | 76.4 | 79.5 | ||
| ALGA0034369 | AG | 329 | 101.6 | 103.1 | 0.22 ± 0.18 |
| GG | 54 | 165.8 | 150.8 | ||
| GG | 208 | 88.9 | 109.2 | ||
| MARC0009863 | AG | 456 | 86.3 | 85.6 | 0.04 ± 0.03 |
| AA | 200 | 103.9 | 102.3 | ||
| TT | 242 | 100.2 | 99.4 | ||
| ALGA0113531 | GT | 464 | 85.9 | 86.7 | 0.03 ± 0.02 |
| GG | 153 | 93.3 | 121.2 |
The most significant SNP in each of the three clusters identified on SSC6 is listed. The phenotypic variance explained by the SNPs is given with the standard error of the estimate.