Table 1. Classification and general features of V. tubiashii according to the MIGS recommendations.
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Domain Bacteria | TAS [10] | ||
Phylum Proteobacteria | TAS [11] | ||
Class Gammaproteobacteria | TAS [12,13] | ||
Current classification | Order Vibrionales | TAS [14] | |
Family Vibrionaceae | TAS [15,16] | ||
Genus Vibrio | TAS [15,17-19] | ||
Species Vibrio tubiashii NCIMB 1337 | TAS [4] | ||
Gram stain | negative | IDA | |
Cell shape | Curved rods (vibroid) | IDA | |
Motility | motile via single polar flagellum | IDA | |
Sporulation | Non-sporulating | IDA | |
Temperature range | Mesophile 12-30oC | IDA | |
Optimum temperature | 25oC | IDA | |
MIGS 6.3 | Salinity | Slightly halophylic, optimum 1-3% NaCl | IDA |
MIGS-22 | Oxygen requirement | Aerobic/ facultative anaerobic | IDA |
Carbon source | Highly diverse | IDA | |
Energy source | Highly diverse | IDA | |
MIGS-6 | Habitat | Marine invertebrates | TAS [20] |
MIGS-16 | Biotic relationship | Parasitic | TAS [3] |
MIGS-14 | Biosafety level | 2 | TAS [4] |
Isolation | Moribund juvenile oyster (Crassostrea virginica) | TAS [3,4] | |
MIGS-4 | Geographical location | Milford, Connecticut, USA | TAS [3] |
MIGS-5 | Sample collection time | 01/02/1965 | TAS [3] |
MIGS 4.1 | latitude | 41.22 N | TAS [3] |
MIGS 4.2 | longitude | -73.06 W | TAS [3] |
MIGS 4.3 | Depth | Not reported | |
MIGS 4.4 | Altitude | Marine | TAS [3] |
Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [21]. If the evidence code is IDA, then the property was directly observed, for a live isolate by one of the authors, or an expert or reputable institution mentioned in the acknowledgements.