Table 1. Classification and general features of O. profundus 506T according to the MIGS recommendations [16].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Current classification | Domain Bacteria | TAS [17] | |
Phylum “Deinococcus-Thermus” | TAS [18,19] | ||
Class Deinococci | TAS [20,21] | ||
Order Thermales | TAS [21,22] | ||
Family Thermaceae | TAS [21,23] | ||
Genus Oceanithermus | TAS [1] | ||
Species Oceanithermus profundus | TAS [1] | ||
Type strain 506 | TAS [1] | ||
Gram stain | negative | TAS [1] | |
Cell shape | rod-shaped | TAS [1] | |
Motility | non-motile | TAS [1] | |
Sporulation | none | TAS [1] | |
Temperature range | 40-68ºC | TAS [1] | |
Optimum temperature | 60°C | TAS [1] | |
Salinity | 1%-5%, optimum 3% NaCl | TAS [1] | |
MIGS-22 | Oxygen requirement | microaerophile | TAS [1] |
Carbon source | carbohydrates | TAS [1] | |
Energy metabolism | chemoorganoheterotroph, lithoheterotroph, organotroph | TAS [1] | |
MIGS-6 | Habitat | deep sea, hydrothermal vent, marine | TAS [1] |
MIGS-15 | Biotic relationship | free-living | TAS [1] |
MIGS-14 | Pathogenicity | none | NAS |
Biosafety level | 1 | NAS [24] | |
Isolation | deep-sea hot vent | TAS [1] | |
MIGS-4 | Geographic location | East Pacific Rise | TAS [1] |
MIGS-5 | Sample collection time | 1999 | TAS [1] |
MIGS-4.1 | Latitude | 12.8 | TAS [1] |
MIGS-4.2 | Longitude | 103.93 | TAS [1] |
MIGS-4.3 | Depth | 2,600 m | TAS [1] |
MIGS-4.4 | Altitude | -2,600 m | NAS |
Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from of the Gene Ontology project [25] If the evidence code is IDA, then the property was directly observed by one of the authors or an expert mentioned in the acknowledgements.