Table 1.
|
|
|
Relative expression level (Oct4 shRNA/control shRNA) |
|
---|---|---|---|---|
Gene symbol | Reference | Agilent probe name | Microarray (Exp. 1–2) | qRT-PCRa(mean ± SD) |
Gapdh | N/A | A_52_P1687 | 0.97–0.94 | N/A |
A_52_P479958 | 0.96–0.96 | |||
Eef1a1 | N/A | A_52_P299505 | 0.87–1.04 | 0.97 ± 0.21 |
(EF1α) | A_51_P118765 | 0.99–1.03 | ||
Actb | N/A | A_51_P173760 | 0.98–0.92 | 1.27 ± 0.16 |
(β-actin) | A_51_P251154 | 1.16–1.17 | ||
Gsk3a | [68] | A_51_P437279 | 1.05–1.23 | 0.97 ± 0.11 |
Gsk3b | [68] | A_52_P641629 | 1.37–1.66 | 1.42 ± 0.16 |
A_51_P514412 | 1.14–1.97 | |||
Axin1 | [69] | A_52_P197007 | 1.21–1.36 | 1.37 ± 0.35 |
Axin2 | [69] | A_52_P54176 | 1.10–1.18 | 0.80 ± 0.04 |
Apc | [70] | A_52_P633752 | 1.22–1.20 | 1.33 ± 0.29 |
A_51_P273378 | 1.89–2.07 | |||
A_52_P284981 | 1.54–1.80 | |||
A_52_P675171 | 1.37–1.76 | |||
A_51_P469822 | 1.29–1.69 | |||
Apc2 | [70] | A_51_P156708 | 0.99–0.97 | 0.42 ± 0.03 |
Btrc | [71] | A_52_P98674 | 1.09–1.08 | 1.15 ± 0.11 |
Ctnnbip1 | [72] | A_51_P335849 | 1.27–1.45 | 1.51 ± 0.29 |
Cby1 | [73] | A_51_P470311 | 0.80–0.98 | 0.70 ± 0.10 |
Tax1bp3 | [74] | A_51_P487384 | 1.14–1.29 | 2.34 ± 0.08 |
Tle1 | [75] | A_52_P328044 | 0.63–0.62 | 0.58 ± 0.09 |
A_51_P199716 | 0.68–0.80 | |||
A_52_P330694 | 0.79–0.98 | |||
Tle2 | [75] | A_51_P175303 | 2.87–1.67 | 2.40 ± 0.86 |
Tle3 | [75] | A_52_P590740 | 0.78–0.88 | 0.88 ± 0.08 |
A_51_P151003 | 1.11–0.95 | |||
Tle4 | [75] | A_51_P346543 | 2.21–2.43 | 2.30 ± 0.39 |
Tle6 | [75] | A_51_P368591 | 0.74–0.69 | 0.44 ± 0.17 |
Aes | [75] | A_51_P243342 | 1.39–1.44 | 7.50 ± 1.88 |
Normalized with Gapdh.
qRT-PCR, quantitative reverse transcription–polymerase chain reaction.