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. 2011 Jun 10;6(6):e20063. doi: 10.1371/journal.pone.0020063

Table 1. Thermotolerant genes identified in this study.

Classification Sub-classification Gene Function Glca Mg2+ b H2O2 c
Energy metabolism Pyruvate metabolism aceE pyruvate dehydrogenase, decarboxylase component E1 ++ S
(Group A) Pyruvate metabolism aceF pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 ++ ++
Pyruvate metabolism lpd lipoamide dehydrogenase, E3 component is part of three enzyme complexes ++
Pyruvate metabolism lipA lipoate synthase ++ +
Propanate metabolism ackA acetate kinase A and propionate kinase 2 ++ S
Pentose phosphate pathway rpe D-ribulose-5-phosphate 3-epimerase ++ S
Respiratory chain cydB cytochrome d terminal oxidase, subunit II + ++
Respiratory chain yhcB cytochrome d terminal oxidase, subunit III ++ S
Outer membrane Lipopolysaccharide biosynthesis gmhB D,D-heptose 1,7-bisphosphate phosphatase +
stabilization Lipopolysaccharide biosynthesis lpcA D-sedoheptulose 7-phosphate isomerase + ++
(Group B) Lipopolysaccharide biosynthesis rfaC ADP-heptose:LPS heptosyl transferase I ++
Lipopolysaccharide biosynthesis rfaD ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding ++
Lipopolysaccharide biosynthesis rfaE fused heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase +
Lipopolysaccharide biosynthesis rfaF ADP-heptose:LPS heptosyltransferase II + S
Lipopolysaccharide biosynthesis rfaG glucosyltransferase I +
Peptidoglycan-associated lipoprotein ydcL predicted lipoprotein + + S
Peptidoglycan-associated lipoprotein yfgL protein assembly complex, lipoprotein component ++ S
Peptidoglycan-associated lipoprotein ynbE predicted lipoprotein + +
Peptidoglycan-associated lipoprotein nlpI conserved protein + +
Peptidoglycan-associated lipoprotein ycdO conserved protein + +
Outer membrane integrity pal peptidoglycan-associated outer membrane lipoprotein ++
Outer membrane integrity tolQ membrane spanning protein in TolA-TolQ-TolR complex ++
Outer membrane integrity tolR membrane spanning protein in TolA-TolQ-TolR complex ++ S
Outer membrane integrity yciM conserved hypothetical protein +
a

According to the data in Figure S4, ratios of growth in the presence of glucose to that in the absence of glucose at 46°C wer estimated. “++” and “+” represent more than 2.0 and 1.5–2.0, respectively.

b

According to the data in Figure S4, ratios of growth in the presence of MgCl2 to that in the absence of MgCl2 at 46°C were estimated. “++” and “+” represent more than 2.0 and 1.5–2.0, respectively.

c

According to the data in Figure S4, ratios of growth in the presence of H2O2 to that in the absence of H2O2 at 30°C were estimated. “S” represents less than 0.5.