Table 3. Comparison of refined neighbour preferences with those previously determined.
| Protein |
Old preferences |
New preferences* |
||
|---|---|---|---|---|
| 5′ | 3′ | 5′ | 3′ | |
| hADAR1 | U=A>C>G | None | U>A>C>G | G>C≈A>U |
| hADAR1-D | ND | ND | U>A>C>G | G>C>A>U |
| hADAR2 | U≈A>C=G | U=G>C=A | U>A>C>G | G>C>U≈A |
| hADAR2-D |
ND |
ND |
U>A>C>G |
C≈G≈A>U |
ND, not determined.
*For new nearest neighbour preferences based on two-term model (Table 2, model 3), > indicates a statistically significant difference with P≤0.05, whereas ≈ indicates P>0.05 ; symbols refer to preferences for immediately adjacent bases. Identical relationships were obtained for immediate neighbours using the eight-term model (Table 2, model 6).