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. 2011 Feb 15;39(11):4691–4708. doi: 10.1093/nar/gkr060

Figure 6.

Figure 6.

sRNA-target relation in S. meliloti and conservation of motifs in sRNAs and their possible targets in other related rhizobium species. (A) Correlation between the direction of accumulation of the sRNAs and their target in the S. meliloti strains mutated for hfq and SMc01113, as derived from Figures 3–5. Red and green shows inverse correlation, and yellow shows that the sRNAs and their predicted targets show accumulation in the similar direction. (B) Schematic representation of the three sra16 binding sites in the dppA1 gene. Sra16 was down-regulated whereas dppA1 was up-regulated in the hfq and smc01113 mutants. (C) Conservation of the target-sRNA motif sequences in the three related rhizobium species. Weblogos were generated as described in the text.