Table 4. Oligonucleotide Primers used in RT-PCR.
Gene | Primer Sequence | Primer Length (nt) | Annealing Temp. (°C) | Size of Amplicon (∼nt) |
PB2 | F: AGCGAAAGCAGGTCAATTATATT | 23 | 61 | 2341 |
R: AGTAGAAACAAGGTCGTTTTTAA | 23 | |||
PB1 | F: AGCGAAAGCAGGCAAACCATTTG | 23 | 61 | 2341 |
R: AGTAGAAACAAGGCATTTTTTCA | 23 | |||
PA | F: AGCGAAAGCAGGTACTGATC | 20 | 61 | 2233 |
R: AGTAGAAACAAGGTACTTTTTTG | 23 | |||
HA | F: GTTCAGAAAAAGCAGGGG | 18 | 55 | 1778 |
R: AGTAGAAACAAGGGTGTTTT | 20 | |||
NP | F: AGCAAAAGACAGGGTAGATAATC | 23 | 55 | 1565 |
R: AGTAGAAACAAGGGTATTTTTC | 22 | |||
NA | F: AGCGAAAGCAGGAGTTTAAAAT | 22 | 55 | 1413 |
R: AGTAGAAACAAGGAGTTTTTTG | 22 | |||
M | F: AGCGAAAGCAGGTAGATATTGA | 22 | 55 | 1027 |
R: AGTAGAAACAAGGTAGTTTTTT | 22 | |||
NS | F: AGCAAAAGCAGGGTGACAAAAA | 22 | 55 | 890 |
R: AGTAGAAACAAGGGTGTTTTTT | 22 |
F: forward primers; R: reverse primers used for PCR amplification.