Table 2.
Number of significant regions detected
| S1 vs Sc | S2-S5 vs Sc* | S6 vs Sc | S7 vs Sc | S8 vs Sc | ||
|---|---|---|---|---|---|---|
| CSAR | Total | 3,235 | 3,306(5) | 57 | 150 | 126 |
| Common | 3,235 | 3,226(2.6) | 52 | 130 | 104 | |
| False Positives | - | 2% | 9% | 13% | 17% | |
| QuEST | Total | 985 | 989(11) | 5,663 | 4,724 | 5,709 |
| Common | 985 | 971(4.2) | 440 | 433 | 422 | |
| False Positives | - | 2% | 92% | 91% | 92% | |
| CisGenome | Total | 2,030 | 14,632(30) | 9 | 91 | 169 |
| Common | 2,030 | 1,633(4) | 1 | 24 | 23 | |
| False Positives | - | 89% | 89% | 74% | 86% | |
| PICS | Total | 2,846 | 1,952(24.7) | 1,256 | 1,575 | 153 |
| Common | 2,846 | 1,253(5.9) | 382 | 435 | 51 | |
| False Positives | - | 36% | 70% | 72% | 67% | |
| MACS | Total | 2,728 | 2,728(0) | 2,821 | 3,687 | 3,624 |
| Common | 2,728 | 2728(0) | 631 | 761 | 716 | |
| False Positives | - | 0% | 78% | 79% | 80% | |
*Results for the in silico-modified libraries (S2-S5) are summarized with its average and standard deviation (in parenthesis)