Skip to main content
. 2010 Oct 1;5(10):1171–1175. doi: 10.4161/psb.5.10.12801

Table 1.

A list of rice helicases as targets for miRNAs with expection ≤3.5

Alignment region
S. no. Gene name Loci miRNA Acc. Expection miRNA Target
RNA helicases
1 DBH LOC_Os04g40970 osa-miR164e 2.5 21 to 2 2642 to 2661
2 DDX46 LOC_Os08g05810 osa-miR414 3 21-2 613–632
3 DDX47 LOC_Os03g46610 osa-miR414 3.5 21-1 1335–1355
4 DDX49 LOC_Os07g43980 osa-miR2094-5p 3.5 21-2 519–538
5 DHX8 LOC_Os06g09280 osa-miR531b 3.5 20-1 203–222
6 DHX16 LOC_Os05g32370 osa-miR1846a-3p 3.5 21-2 480–499
7 DHX36 LOC_Os03g53760 osa-miR1319 3.5 24-5 2516–2536
8 NRH2 LOC_Os03g61220 osa-miR396a 3.5 21-2 803–822
9 PRP5 LOC_Os08g06344 osa-miR414 2 21-2 1030–1049
10 RNAhA LOC_Os01g56190 osa-miR414 3.5 21-2 3064–3083
11 U5.snRNP 200 kDa LOC_Os02g01740 osa-miR395o 3 21-2 4069–4088
DNA helicases
12 ABP LOC_Os06g33520 osa-miR414 0 21-2 442–461
13 MCM3 LOC_Os05g39850 osa-miR1860-3p 3.5 22-3 1385–1404
14 RecQSim LOC_Os05g05810 osa-miR1854-5p 2 21-2 2553–2572
Others
15 CTD2 LOC_Os02g43460 osa-miR414 2.5 21-2 1408–1427
16 HADfp LOC_Os03g53760 osa-miR1319 3.5 24-5 2516–2536
17 helicase C6F12.16c LOC_Os11g07500 osa-miR408 3.5 21-1 172–192