Table 1.
Alignment region | ||||||
S. no. | Gene name | Loci | miRNA Acc. | Expection | miRNA | Target |
RNA helicases | ||||||
1 | DBH | LOC_Os04g40970 | osa-miR164e | 2.5 | 21 to 2 | 2642 to 2661 |
2 | DDX46 | LOC_Os08g05810 | osa-miR414 | 3 | 21-2 | 613–632 |
3 | DDX47 | LOC_Os03g46610 | osa-miR414 | 3.5 | 21-1 | 1335–1355 |
4 | DDX49 | LOC_Os07g43980 | osa-miR2094-5p | 3.5 | 21-2 | 519–538 |
5 | DHX8 | LOC_Os06g09280 | osa-miR531b | 3.5 | 20-1 | 203–222 |
6 | DHX16 | LOC_Os05g32370 | osa-miR1846a-3p | 3.5 | 21-2 | 480–499 |
7 | DHX36 | LOC_Os03g53760 | osa-miR1319 | 3.5 | 24-5 | 2516–2536 |
8 | NRH2 | LOC_Os03g61220 | osa-miR396a | 3.5 | 21-2 | 803–822 |
9 | PRP5 | LOC_Os08g06344 | osa-miR414 | 2 | 21-2 | 1030–1049 |
10 | RNAhA | LOC_Os01g56190 | osa-miR414 | 3.5 | 21-2 | 3064–3083 |
11 | U5.snRNP 200 kDa | LOC_Os02g01740 | osa-miR395o | 3 | 21-2 | 4069–4088 |
DNA helicases | ||||||
12 | ABP | LOC_Os06g33520 | osa-miR414 | 0 | 21-2 | 442–461 |
13 | MCM3 | LOC_Os05g39850 | osa-miR1860-3p | 3.5 | 22-3 | 1385–1404 |
14 | RecQSim | LOC_Os05g05810 | osa-miR1854-5p | 2 | 21-2 | 2553–2572 |
Others | ||||||
15 | CTD2 | LOC_Os02g43460 | osa-miR414 | 2.5 | 21-2 | 1408–1427 |
16 | HADfp | LOC_Os03g53760 | osa-miR1319 | 3.5 | 24-5 | 2516–2536 |
17 | helicase C6F12.16c | LOC_Os11g07500 | osa-miR408 | 3.5 | 21-1 | 172–192 |